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    Syx18 Syntaxin 18 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42933, updated on 8-Oct-2018

    Summary

    Official Symbol
    Syx18provided by FlyBase
    Official Full Name
    Syntaxin 18provided by FlyBase
    Primary source
    FLYBASE:FBgn0039212
    Locus tag
    Dmel_CG13626
    Gene type
    protein coding
    RNA name
    syntaxin 18
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13626; Dm Ufe1; Dmel\CG13626; DmSyx18; gtx; Syx; Ufe1/Syntaxin 18

    Genomic context

    See Syx18 in Genome Data Viewer
    Location:
    96A12-96A13; 3-85 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (24623802..24625562, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20449524..20451284, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene molting defective Neighboring gene ncRNA Neighboring gene atlastin Neighboring gene wsck Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    SNARE binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    neuromuscular junction development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuromuscular synaptic transmission IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    retrograde vesicle-mediated transport, Golgi to ER IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    SNARE complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    neuromuscular junction IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    syntaxin 18
    Names
    CG13626-PA
    Syx18-PA
    gtaxin
    syntaxin

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      24623802..24625562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079761.4NP_524485.1  syntaxin 18 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524485.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VC58
      Related
      FBpp0084050, FBtr0084670
      Conserved Domains (2) summary
      cd15850
      Location:306364
      SNARE_syntaxin18; SNARE motif, subgroup Qa
      pfam10496
      Location:290
      Syntaxin-18_N; SNARE-complex protein Syntaxin-18 N-terminus
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