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    CHTOP chromatin target of PRMT1 [ Gallus gallus (chicken) ]

    Gene ID: 426357, updated on 14-Feb-2019

    Summary

    Official Symbol
    CHTOPprovided by CGNC
    Official Full Name
    chromatin target of PRMT1provided by CGNC
    Primary source
    CGNC:10475
    See related
    Ensembl:ENSGALG00000042129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C1orf77; C25H1orf77
    Orthologs

    Genomic context

    See CHTOP in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 25 NC_006112.4 (3329538..3335937)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 25 NC_006112.3 (1847078..1853476, complement)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 25 NC_006112.2 (702074..708078, complement)

    Chromosome 25 - NC_006112.4Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A13 Neighboring gene S100 calcium binding protein A1 Neighboring gene SMAD family member 4 Neighboring gene SNAP associated protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    Friend of PRMT1 protein; chromatin target of PRMT1 protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006112.4 Reference GRCg6a Primary Assembly

      Range
      3329538..3335937
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015298561.2XP_015154047.1  chromatin target of PRMT1 protein isoform X5

    2. XM_025143487.1XP_024999255.1  chromatin target of PRMT1 protein isoform X4

      Conserved Domains (1) summary
      pfam13865
      Location:161196
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    3. XM_025143486.1XP_024999254.1  chromatin target of PRMT1 protein isoform X3

      Conserved Domains (1) summary
      pfam13865
      Location:162197
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    4. XM_015298559.2XP_015154045.1  chromatin target of PRMT1 protein isoform X2

      UniProtKB/TrEMBL
      A0A1D5P5J0
      Conserved Domains (1) summary
      pfam13865
      Location:206244
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    5. XM_015298558.2XP_015154044.1  chromatin target of PRMT1 protein isoform X1

      Conserved Domains (1) summary
      pfam13865
      Location:207245
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    6. XM_004948216.3XP_004948273.1  chromatin target of PRMT1 protein isoform X2

      See identical proteins and their annotated locations for XP_004948273.1

      UniProtKB/TrEMBL
      A0A1D5P5J0
      Related
      ENSGALP00000047959.1, ENSGALT00000057191.2
      Conserved Domains (1) summary
      pfam13865
      Location:206244
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    7. XM_025143488.1XP_024999256.1  chromatin target of PRMT1 protein isoform X3

      Conserved Domains (1) summary
      pfam13865
      Location:162197
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
    8. XM_424013.6XP_424013.3  chromatin target of PRMT1 protein isoform X1

      See identical proteins and their annotated locations for XP_424013.3

      Conserved Domains (1) summary
      pfam13865
      Location:207245
      FoP_duplication; C-terminal duplication domain of Friend of PRMT1
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