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    HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [ Gallus gallus (chicken) ]

    Gene ID: 424136, updated on 20-Jun-2018

    Summary

    Symbol
    HNRNPA1provided by CGNC
    Full Name
    heterogeneous nuclear ribonucleoprotein A1provided by CGNC
    Primary source
    CGNC:7027
    See related
    Ensembl:ENSGALG00000042011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Annotation information
    Note: This gene was formerly named HNRNPA3 (heterogeneous nuclear ribonucleoprotein A3) in Annotation release 102. The gene name was changed to HNRNPA1 (heterogeneous nuclear ribonucleoprotein A1) in collaboration with the Chicken Gene Nomenclature Committee (CGNC) based on sequence similarity to HNRNPA1 genes in other species. [30 Nov 2015]
    Orthologs

    Genomic context

    See HNRNPA1 in Genome Data Viewer
    Location:
    chromosome: 33
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 33 NC_008465.4 (7724007..7730306)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 33 NC_008465.3 (1158748..1165042)

    Chromosome 33 - NC_008465.4Genomic Context describing neighboring genes Neighboring gene single-strand-selective monofunctional uracil-DNA glycosylase 1 Neighboring gene chromobox 5 Neighboring gene coatomer protein complex subunit zeta 1 Neighboring gene zinc finger protein 385A Neighboring gene valine--tRNA ligase, mitochondrial-like

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Spliceosome, organism-specific biosystem (from KEGG)
      Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
    • Spliceosome, conserved biosystem (from KEGG)
      Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...

    General protein information

    Preferred Names
    heterogeneous nuclear ribonucleoprotein A1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001318418.1NP_001305347.1  heterogeneous nuclear ribonucleoprotein A1

      Status: PROVISIONAL

      Source sequence(s)
      AJ719821
      UniProtKB/TrEMBL
      Q5ZLB3
      Conserved Domains (3) summary
      cd12580
      Location:105181
      RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      cd12761
      Location:1292
      RRM1_hnRNPA1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      pfam11627
      Location:324340
      HnRNPA1; Nuclear factor hnRNPA1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_008465.4 Reference GRCg6a Primary Assembly

      Range
      7724007..7730306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015300355.2XP_015155841.1  heterogeneous nuclear ribonucleoprotein A1 isoform X2

      Conserved Domains (4) summary
      COG0724
      Location:1168
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12578
      Location:1592
      RRM1_hnRNPA_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A subfamily
      cd12580
      Location:105181
      RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      pfam11627
      Location:324351
      HnRNPA1; Nuclear factor hnRNPA1
    2. XM_015300354.2XP_015155840.1  heterogeneous nuclear ribonucleoprotein A1 isoform X1

      Conserved Domains (3) summary
      cd12580
      Location:105181
      RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      cd12761
      Location:1292
      RRM1_hnRNPA1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      pfam11627
      Location:324351
      HnRNPA1; Nuclear factor hnRNPA1
    3. XM_015300356.2XP_015155842.1  heterogeneous nuclear ribonucleoprotein A1 isoform X3

      Conserved Domains (3) summary
      cd12578
      Location:1592
      RRM1_hnRNPA_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A subfamily
      cd12580
      Location:105181
      RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      pfam11627
      Location:300327
      HnRNPA1; Nuclear factor hnRNPA1
    4. XM_015300358.2XP_015155844.1  heterogeneous nuclear ribonucleoprotein A1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5P5G1
      Related
      ENSGALP00000047929.1
      Conserved Domains (3) summary
      cd12580
      Location:105181
      RRM2_hnRNPA1; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      cd12761
      Location:1292
      RRM1_hnRNPA1; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins
      pfam11627
      Location:300316
      HnRNPA1; Nuclear factor hnRNPA1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001031253.1: Suppressed sequence

      Description
      NM_001031253.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Support Center