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    SLC40A1 solute carrier family 40 member 1 [ Gallus gallus (chicken) ]

    Gene ID: 423984, updated on 14-Feb-2019

    Summary

    Symbol
    SLC40A1provided by CGNC
    Full Name
    solute carrier family 40 member 1provided by CGNC
    Primary source
    CGNC:52102
    See related
    Ensembl:ENSGALG00000043618
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See SLC40A1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 7 NC_006094.5 (388104..402908)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 7 NC_006094.4 (353838..368643)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 7 NC_006094.3 (331714..346093)

    Chromosome 7 - NC_006094.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532753 Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene asparagine synthetase domain containing 1 Neighboring gene uncharacterized LOC112532755 Neighboring gene uncharacterized LOC112532754 Neighboring gene collagen type V alpha 2 chain Neighboring gene WD repeat domain 75 Neighboring gene collagen type III alpha 1 chain

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Ferroptosis, organism-specific biosystem (from KEGG)
      Ferroptosis, organism-specific biosystemFerroptosis is a regulated form of cell death and characterized by a production of reactive oxygen species (ROS) from accumulated iron and lipid peroxidation. It can be induced by experimental compou...
    • Ferroptosis, conserved biosystem (from KEGG)
      Ferroptosis, conserved biosystemFerroptosis is a regulated form of cell death and characterized by a production of reactive oxygen species (ROS) from accumulated iron and lipid peroxidation. It can be induced by experimental compou...

    General gene information

    Homology

    General protein information

    Preferred Names
    solute carrier family 40 member 1
    Names
    solute carrier family 40 (iron-regulated transporter), member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012913.1NP_001012931.1  solute carrier family 40 member 1

      See identical proteins and their annotated locations for NP_001012931.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ851647
      UniProtKB/TrEMBL
      Q5F3K3
      Related
      ENSGALP00000045816.1, ENSGALT00000052782.2
      Conserved Domains (1) summary
      pfam06963
      Location:23539
      FPN1; Ferroportin1 (FPN1)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006094.5 Reference GRCg6a Primary Assembly

      Range
      388104..402908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015289163.2XP_015144649.1  solute carrier family 40 member 1 isoform X1

      Conserved Domains (1) summary
      pfam06963
      Location:33535
      FPN1; Ferroportin1 (FPN1)
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