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    CROT carnitine O-octanoyltransferase [ Gallus gallus (chicken) ]

    Gene ID: 420533, updated on 20-Jun-2018

    Summary

    Symbol
    CROTprovided by CGNC
    Full Name
    carnitine O-octanoyltransferaseprovided by CGNC
    Primary source
    CGNC:6689
    See related
    Ensembl:ENSGALG00000008813
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See CROT in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 2 NC_006089.5 (20644335..20664076)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 2 NC_006089.4 (20672212..20692001)

    Chromosome 2 - NC_006089.5Genomic Context describing neighboring genes Neighboring gene N-myristoyltransferase 2 Neighboring gene ribonuclease P/MRP subunit p38 Neighboring gene acyl-CoA binding domain containing 7 Neighboring gene oleoyl-ACP hydrolase Neighboring gene uncharacterized LOC107052579 Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 1-like A Neighboring gene ATP binding cassette subfamily B member 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Peroxisome, organism-specific biosystem (from KEGG)
      Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
    • Peroxisome, conserved biosystem (from KEGG)
      Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...

    General gene information

    Homology

    General protein information

    Preferred Names
    peroxisomal carnitine O-octanoyltransferase
    XP_003640711.1
    XP_004939321.1
    XP_418635.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006089.5 Reference GRCg6a Primary Assembly

      Range
      20644335..20664076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004939264.3XP_004939321.1  peroxisomal carnitine O-octanoyltransferase

      See identical proteins and their annotated locations for XP_004939321.1

      UniProtKB/TrEMBL
      E1BRU9
      Related
      ENSGALP00000014311.5
      Conserved Domains (1) summary
      pfam00755
      Location:29603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
    2. XM_003640663.4XP_003640711.1  peroxisomal carnitine O-octanoyltransferase

      See identical proteins and their annotated locations for XP_003640711.1

      UniProtKB/TrEMBL
      E1BRU9
      Conserved Domains (1) summary
      pfam00755
      Location:29603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
    3. XM_418635.6XP_418635.2  peroxisomal carnitine O-octanoyltransferase

      See identical proteins and their annotated locations for XP_418635.2

      UniProtKB/TrEMBL
      E1BRU9
      Conserved Domains (1) summary
      pfam00755
      Location:29603
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
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