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    GPC5 glypican 5 [ Gallus gallus (chicken) ]

    Gene ID: 418795, updated on 7-Jul-2018

    Summary

    Symbol
    GPC5provided by CGNC
    Full Name
    glypican 5provided by CGNC
    Primary source
    CGNC:12685
    See related
    Ensembl:ENSGALG00000016902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See GPC5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (148802059..149443656, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (147386374..148025614, complement)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene glypican 6 Neighboring gene uncharacterized LOC112531540 Neighboring gene uncharacterized LOC112531541 Neighboring gene uncharacterized LOC107050997 Neighboring gene microRNA 92a-1 Neighboring gene microRNA 19b-1 Neighboring gene microRNA 20a Neighboring gene microRNA 19a Neighboring gene microRNA 18a Neighboring gene microRNA 17 Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene uncharacterized LOC112531542

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      148802059..149443656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025146758.1XP_025002526.1  glypican-5 isoform X5

      Conserved Domains (1) summary
      pfam01153
      Location:104620
      Glypican
    2. XM_015274645.2XP_015130131.1  glypican-5 isoform X3

      Conserved Domains (1) summary
      pfam01153
      Location:117633
      Glypican; Glypican
    3. XM_015274639.2XP_015130125.1  glypican-5 isoform X2

      Conserved Domains (1) summary
      pfam01153
      Location:102638
      Glypican; Glypican
    4. XM_004938584.3XP_004938641.1  glypican-5 isoform X1

      Conserved Domains (1) summary
      pfam01153
      Location:102648
      Glypican; Glypican
    5. XM_025146760.1XP_025002528.1  glypican-5 isoform X8

      Conserved Domains (1) summary
      pfam01153
      Location:102603
      Glypican
    6. XM_004938598.3XP_004938655.1  glypican-5 isoform X10

      Conserved Domains (1) summary
      pfam01153
      Location:102546
      Glypican; Glypican
    7. XM_004938587.3XP_004938644.1  glypican-5 isoform X4

      Conserved Domains (1) summary
      pfam01153
      Location:102590
      Glypican; Glypican
    8. XM_015274655.2XP_015130141.1  glypican-5 isoform X7

      Conserved Domains (1) summary
      pfam01153
      Location:102590
      Glypican; Glypican
    9. XM_025146759.1XP_025002527.1  glypican-5 isoform X6

      Conserved Domains (1) summary
      pfam01153
      Location:102590
      Glypican
    10. XM_004938602.3XP_004938659.1  glypican-5 isoform X13

      UniProtKB/TrEMBL
      F1P015
      Related
      ENSGALP00000027271.5
      Conserved Domains (1) summary
      pfam01153
      Location:102545
      Glypican; Glypican
    11. XM_004938599.3XP_004938656.1  glypican-5 isoform X11

      Related
      ENSGALP00000044739.1
      Conserved Domains (1) summary
      pfam01153
      Location:102545
      Glypican; Glypican
    12. XM_025146761.1XP_025002529.1  glypican-5 isoform X9

      Conserved Domains (1) summary
      pfam01153
      Location:102571
      Glypican
    13. XM_025146762.1XP_025002530.1  glypican-5 isoform X12

      Conserved Domains (1) summary
      pfam01153
      Location:102546
      Glypican
    14. XM_025146763.1XP_025002531.1  glypican-5 isoform X14

      Conserved Domains (1) summary
      pfam01153
      Location:102502
      Glypican
    15. XM_025146764.1XP_025002532.1  glypican-5 isoform X15

      Conserved Domains (1) summary
      pfam01153
      Location:102508
      Glypican

    RNA

    1. XR_001462916.2 RNA Sequence

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