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    TRIP4 thyroid hormone receptor interactor 4 [ Gallus gallus (chicken) ]

    Gene ID: 415330, updated on 14-Feb-2019

    Summary

    Symbol
    TRIP4provided by CGNC
    Full Name
    thyroid hormone receptor interactor 4provided by CGNC
    Primary source
    CGNC:14594
    See related
    Ensembl:ENSGALG00000030672
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See TRIP4 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 10 NC_006097.5 (1642103..1670314, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 10 NC_006097.4 (1112226..1140422, complement)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 10 NC_006097.3 (677558..713849, complement)

    Chromosome 10 - NC_006097.5Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 2 Neighboring gene zinc finger protein 609 Neighboring gene microRNA 6692 Neighboring gene KIAA0101 Neighboring gene casein kinase 1 gamma 1 Neighboring gene peptidylprolyl isomerase B (cyclophilin B)

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    activating signal cointegrator 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006097.5 Reference GRCg6a Primary Assembly

      Range
      1642103..1670314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015279083.2XP_015134569.1  activating signal cointegrator 1 isoform X2

      Related
      ENSGALP00000048913.3, ENSGALT00000079723.3
      Conserved Domains (2) summary
      cd06554
      Location:434547
      ASCH_ASC-1_like; ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain ...
      pfam06221
      Location:168216
      zf-C2HC5; Putative zinc finger motif, C2HC5-type
    2. XM_025154058.1XP_025009826.1  activating signal cointegrator 1 isoform X3

      Conserved Domains (2) summary
      cd06554
      Location:415528
      ASCH_ASC-1_like; ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain ...
      pfam06221
      Location:149197
      zf-C2HC5; Putative zinc finger motif, C2HC5-type
    3. XM_025154059.1XP_025009827.1  activating signal cointegrator 1 isoform X4

      Conserved Domains (2) summary
      cd06554
      Location:434547
      ASCH_ASC-1_like; ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain ...
      pfam06221
      Location:168216
      zf-C2HC5; Putative zinc finger motif, C2HC5-type
    4. XM_025154057.1XP_025009825.1  activating signal cointegrator 1 isoform X1

      Conserved Domains (2) summary
      cd06554
      Location:434547
      ASCH_ASC-1_like; ASC-1 homology domain, ASC-1-like subfamily. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain ...
      pfam06221
      Location:168216
      zf-C2HC5; Putative zinc finger motif, C2HC5-type
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