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    hnrnpr heterogeneous nuclear ribonucleoprotein R [ Danio rerio (zebrafish) ]

    Gene ID: 406735, updated on 1-Aug-2018

    Summary

    Official Symbol
    hnrnprprovided by ZNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein Rprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2766
    See related
    Ensembl:ENSDARG00000014569 Vega:OTTDARG00000037169
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    hnrpr; zgc:56523; wu:fb97a09; wu:fe01h03; wu:cegs2571

    Genomic context

    See hnrnpr in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (74326..82497, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (74236..82407, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene zinc fingers and homeoboxes protein 2-like Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 8 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene ATP synthase inhibitory factor subunit 1a

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • mRNA processing, organism-specific biosystem (from WikiPathways)
      mRNA processing, organism-specific biosystemThis process describes the conversion of precursor messenger RNA into mature messenger RNA (mRNA). The pre-mRNA molecule undergoes three main modifications. These modifications are 5' capping, 3' pol...

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    axon extension involved in axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    viral nucleocapsid IEA
    Inferred from Electronic Annotation
    more info
     
    virion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    heterogeneous nuclear ribonucleoprotein R

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213426.1NP_998591.1  heterogeneous nuclear ribonucleoprotein R

      See identical proteins and their annotated locations for NP_998591.1

      Status: PROVISIONAL

      Source sequence(s)
      BC053413
      UniProtKB/TrEMBL
      Q7SZC9
      Related
      ENSDARP00000016984.8, OTTDARP00000041631, ENSDART00000027864.9, OTTDART00000052936
      Conserved Domains (1) summary
      cl17169
      Location:169200
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      74326..82497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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