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    RPS18 ribosomal protein S18 [ Canis lupus familiaris (dog) ]

    Gene ID: 403685, updated on 2-Oct-2018

    Summary

    Official Symbol
    RPS18provided by VGNC
    Official Full Name
    ribosomal protein S18provided by VGNC
    Primary source
    VGNC:VGNC:45733
    See related
    Ensembl:ENSCAFG00000000950
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See RPS18 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 12 NC_006594.3 (2712958..2718657)

    Chromosome 12 - NC_006594.3Genomic Context describing neighboring genes Neighboring gene ring finger protein 1 Neighboring gene VPS52, GARP complex subunit Neighboring gene uncharacterized LOC111098219 Neighboring gene beta-1,3-galactosyltransferase 4 Neighboring gene WD repeat domain 46

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006594.3 Chromosome 12 Reference CanFam3.1 Primary Assembly

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytosolic small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
     
    small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001048082.1NP_001041547.1  40S ribosomal protein S18

      See identical proteins and their annotated locations for NP_001041547.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ630366
      UniProtKB/Swiss-Prot
      Q5TJE9
      Related
      ENSCAFP00000001357.3, ENSCAFT00000001473.3
      Conserved Domains (1) summary
      PTZ00134
      Location:1152
      PTZ00134; 40S ribosomal protein S18; Provisional

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006594.3 Reference CanFam3.1 Primary Assembly

      Range
      2712958..2718657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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