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    fam126a family with sequence similarity 126, member A [ Danio rerio (zebrafish) ]

    Gene ID: 402926, updated on 9-Sep-2018

    Summary

    Official Symbol
    fam126aprovided by ZNC
    Official Full Name
    family with sequence similarity 126, member Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1806
    See related
    Ensembl:ENSDARG00000026762 Vega:OTTDARG00000037269
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:77228
    Orthologs

    Genomic context

    See fam126a in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (2602852..2664925)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (2671985..2734039)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene cell division cycle associated 7b Neighboring gene si:ch73-345f18.3 Neighboring gene si:ch73-24k9.2 Neighboring gene translocase of outer mitochondrial membrane 7 homolog (yeast)

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Clone Names

    • MGC77228

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    myelination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    phosphatidylinositol phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phosphatidylinositol phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protein localization to plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein localization to plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205630.1NP_991193.1  hyccin

      See identical proteins and their annotated locations for NP_991193.1

      Status: PROVISIONAL

      Source sequence(s)
      BC065326
      UniProtKB/Swiss-Prot
      Q6P121
      Related
      ENSDARP00000036397.4, OTTDARP00000041770, ENSDART00000033132.6, OTTDART00000053108
      Conserved Domains (1) summary
      pfam09790
      Location:22330
      Hyccin; Hyccin

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      2602852..2664925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009293948.3XP_009292223.1  hyccin isoform X2

      Conserved Domains (1) summary
      pfam09790
      Location:22330
      Hyccin; Hyccin
    2. XM_005173738.4XP_005173795.1  hyccin isoform X1

      See identical proteins and their annotated locations for XP_005173795.1

      UniProtKB/Swiss-Prot
      Q6P121
      Conserved Domains (1) summary
      pfam09790
      Location:22330
      Hyccin; Hyccin
    3. XM_005173736.4XP_005173793.1  hyccin isoform X1

      See identical proteins and their annotated locations for XP_005173793.1

      UniProtKB/Swiss-Prot
      Q6P121
      Conserved Domains (1) summary
      pfam09790
      Location:22330
      Hyccin; Hyccin
    4. XM_021468030.1XP_021323705.1  hyccin isoform X1

      Conserved Domains (1) summary
      pfam09790
      Location:22330
      Hyccin; Hyccin

    RNA

    1. XR_225184.4 RNA Sequence

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