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    macrod2.S MACRO domain containing 2 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 398781, updated on 5-Aug-2018

    Summary

    Symbol
    macrod2.S
    Full Name
    MACRO domain containing 2 S homeolog
    Primary source
    Xenbase:XB-GENE-5865181
    Locus tag
    XELAEV_18026459mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    macrod2

    Genomic context

    See macrod2.S in Genome Data Viewer
    Location:
    chromosome: 5L
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (25878664..27403444)

    Chromosome 5L - NC_030732.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5-like Neighboring gene ESF1 nucleolar pre-rRNA processing protein homolog L homeolog Neighboring gene fibronectin leucine rich transmembrane protein 3 L homeolog Neighboring gene kinesin-like protein KIF16B Neighboring gene uncharacterized LOC108716308

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030732.1 Chromosome 5L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    O-acetyl-ADP-ribose deacetylase MACROD2
    Names
    MACRO domain-containing protein 2
    [Protein ADP-ribosylglutamate] hydrolase

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089698.1NP_001083167.1  O-acetyl-ADP-ribose deacetylase MACROD2

      See identical proteins and their annotated locations for NP_001083167.1

      Status: PROVISIONAL

      Source sequence(s)
      BC060026
      UniProtKB/Swiss-Prot
      Q6PAV8
      Conserved Domains (2) summary
      COG2110
      Location:73237
      YmdB; O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain [Translation, ribosomal structure and biogenesis]
      cd02908
      Location:69235
      Macro_Appr_pase_like; Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose ...

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030732.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      25878664..27403444
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018261753.1XP_018117242.1  O-acetyl-ADP-ribose deacetylase MACROD2 isoform X1

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