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    HTR1B 5-hydroxytryptamine receptor 1B [ Sus scrofa (pig) ]

    Gene ID: 397563, updated on 2-Oct-2018

    Summary

    Gene symbol
    HTR1B
    Gene description
    5-hydroxytryptamine receptor 1B
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Also known as
    5-HT1B; 5-HT1Db
    Orthologs

    Genomic context

    See HTR1B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (88597510..88598682)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (99465592..99466764)

    Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene meiotic double-stranded break formation protein 4 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene adenosylhomocysteinase pseudogene Neighboring gene interphotoreceptor matrix proteoglycan 1

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    G protein-coupled serotonin receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    adenylate cyclase-inhibiting serotonin receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    behavior IEA
    Inferred from Electronic Annotation
    more info
     
    bone remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to alkaloid ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cellular response to drug ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of serotonin secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of behavior IEA
    Inferred from Electronic Annotation
    more info
     
    vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    5-hydroxytryptamine receptor 1B
    Names
    5-HT-1B
    5-hydroxytryptamine 1B receptor
    serotonin receptor 1B

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_214298.1NP_999463.1  5-hydroxytryptamine receptor 1B

      See identical proteins and their annotated locations for NP_999463.1

      Status: PROVISIONAL

      Source sequence(s)
      AF188626
      UniProtKB/TrEMBL
      Q9GLP5
      Conserved Domains (2) summary
      pfam00001
      Location:67369
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:64186
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

      Range
      88597510..88598682
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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