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    PIK3R5 phosphoinositide-3-kinase regulatory subunit 5 [ Sus scrofa (pig) ]

    Gene ID: 396851, updated on 2-Oct-2018

    Summary

    Gene symbol
    PIK3R5
    Gene description
    phosphoinositide-3-kinase regulatory subunit 5
    See related
    Ensembl:ENSSSCG00000017991
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Also known as
    P101
    Annotation information
    Annotation category: partial on reference assembly
    Expression
    Broad expression in spleen (RPKM 20.7), lung (RPKM 7.4) and 5 other tissues See more
    Orthologs

    Genomic context

    See PIK3R5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (53979206..54046927, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (56731153..56799397, complement)

    Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 6 like Neighboring gene phosphoinositide-3-kinase regulatory subunit 6 Neighboring gene uncharacterized LOC106505520 Neighboring gene netrin 1 Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    1-phosphatidylinositol-3-kinase regulator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    G-protein beta/gamma-subunit complex binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    phosphatidylinositol 3-kinase complex, class IB IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    phosphoinositide 3-kinase regulatory subunit 5
    Names
    IB PI3-kinase p101 subunit
    PI3-kinase p101 subunit
    PI3-kinase regulatory subunit 5
    p101-PI3K
    phosphatidylinositol 4,5-bisphosphate 3-kinase regulatory subunit
    ptdIns-3-kinase p101
    ptdIns-3-kinase regulatory subunit

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213851.1NP_999016.1  phosphoinositide 3-kinase regulatory subunit 5

      See identical proteins and their annotated locations for NP_999016.1

      Status: PROVISIONAL

      Source sequence(s)
      Y10742
      UniProtKB/Swiss-Prot
      O02696
      Related
      ENSSSCP00000053027.1, ENSSSCT00000053644.1
      Conserved Domains (1) summary
      pfam10486
      Location:6877
      PI3K_1B_p101; Phosphoinositide 3-kinase gamma adapter protein p101 subunit

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

      Range
      53979206..54046927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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