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    nolc1 nucleolar and coiled-body phosphoprotein 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 395027, updated on 20-Jun-2018

    Summary

    Symbol
    nolc1provided by Xenbase
    Full Name
    nucleolar and coiled-body phosphoprotein 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-6454592
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    p130; nopp130; nopp140; ns5atp13
    Orthologs

    Genomic context

    See nolc1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (52895949..52919761)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668240.1 (41630601..41654413)

    Chromosome 7 - NC_030683.1Genomic Context describing neighboring genes Neighboring gene synaptopodin 2-like Neighboring gene myozenin 1 Neighboring gene ELOVL fatty acid elongase 3 Neighboring gene golgi brefeldin A resistant guanine nucleotide exchange factor 1

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    nucleolar and coiled-body phosphoprotein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039730.1NP_001034819.1  nucleolar and coiled-body phosphoprotein 1

      See identical proteins and their annotated locations for NP_001034819.1

      Status: PROVISIONAL

      Source sequence(s)
      CR848207
      UniProtKB/TrEMBL
      Q28EK2
      Conserved Domains (1) summary
      pfam05022
      Location:842910
      SRP40_C; SRP40, C-terminal domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030683.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      52895949..52919761
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012966311.1XP_012821765.1  nucleolar and coiled-body phosphoprotein 1 isoform X2

      Conserved Domains (1) summary
      pfam05022
      Location:787855
      SRP40_C; SRP40, C-terminal domain
    2. XM_012966312.1XP_012821766.1  nucleolar and coiled-body phosphoprotein 1 isoform X3

      Conserved Domains (1) summary
      pfam05022
      Location:678746
      SRP40_C; SRP40, C-terminal domain
    3. XM_018095326.1XP_017950815.1  nucleolar and coiled-body phosphoprotein 1 isoform X1

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