Format

Send to:

Choose Destination
    • Showing Current items.

    lmnb2.S lamin B2 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 394291, updated on 8-Apr-2017

    Summary

    Official Symbol
    lmnb2.S
    Official Full Name
    lamin B2 S homeolog
    Primary source
    Xenbase:XB-GENE-6254662
    Locus tag
    XELAEV_18009631mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    lmnb2; lmnb2-a; lmnb2-b; lamin-b2; Lamin-L(II)

    Genomic context

    See lmnb2.S in Genome Data Viewer
    Location:
    chromosome: 1S
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (77731676..77749789, complement)

    Chromosome 1S - NC_030725.1Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 9 S homeolog Neighboring gene translocase of inner mitochondrial membrane 13 homolog S homeolog Neighboring gene 60S ribosomal protein L36 Neighboring gene major facilitator superfamily domain-containing protein 12-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030725.1 Chromosome 1S Reference Xenopus_laevis_v2 Primary Assembly

    Pathways from BioSystems

    • Apoptosis, organism-specific biosystem (from KEGG)
      Apoptosis, organism-specific biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...
    • Apoptosis, conserved biosystem (from KEGG)
      Apoptosis, conserved biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087478.1NP_001080947.1  lamin B2 S homeolog

      See identical proteins and their annotated locations for NP_001080947.1

      Status: PROVISIONAL

      Source sequence(s)
      BC073219
      UniProtKB/TrEMBL
      Q6GPC2
      Conserved Domains (3) summary
      pfam00038
      Location:35391
      Filament; Intermediate filament protein
      pfam00932
      Location:474583
      LTD; Lamin Tail Domain
      pfam10351
      Location:263383
      Apt1; Golgi-body localization protein domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030725.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      77731676..77749789 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018233977.1XP_018089466.1  lamin B2 S homeolog isoform X1

    Support Center