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    fkbp8 FKBP prolyl isomerase 8 [ Danio rerio (zebrafish) ]

    Gene ID: 393858, updated on 4-May-2019

    Summary

    Official Symbol
    fkbp8provided by ZNC
    Official Full Name
    FKBP prolyl isomerase 8provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1849
    See related
    Ensembl:ENSDARG00000001734
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:77672
    Orthologs

    Genomic context

    See fkbp8 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (20925849..20950448, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (20900871..20925470, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 22 NC_007133.5 (21246195..21270794, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene DOT1-like histone H3K79 methyltransferase Neighboring gene elongation factor RNA polymerase II Neighboring gene single stranded DNA binding protein 4 Neighboring gene transmembrane protein 59-like

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Clone Names

    • MGC77672

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    peptidyl-prolyl cis-trans isomerase FKBP8
    Names
    FK506 binding protein 8
    NP_957178.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200884.1NP_957178.1  peptidyl-prolyl cis-trans isomerase FKBP8

      See identical proteins and their annotated locations for NP_957178.1

      Status: PROVISIONAL

      Source sequence(s)
      BC063964
      UniProtKB/TrEMBL
      Q6P3J6
      Related
      ENSDARP00000000956.9, ENSDART00000002029.10
      Conserved Domains (4) summary
      sd00006
      Location:265293
      TPR; TPR repeat [structural motif]
      pfam00254
      Location:106194
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
      pfam00515
      Location:299332
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:266330
      TPR_11; TPR repeat

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      20925849..20950448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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