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    elovl5 ELOVL fatty acid elongase 5 [ Danio rerio (zebrafish) ]

    Gene ID: 393425, updated on 1-Aug-2018

    Summary

    Official Symbol
    elovl5provided by ZNC
    Official Full Name
    ELOVL fatty acid elongase 5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040407-2
    See related
    Ensembl:ENSDARG00000004979 Vega:OTTDARG00000020641
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:63549
    Orthologs

    Genomic context

    See elovl5 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (2394197..2417402)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (2236623..2259827, complement)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene kelch-like family member 31 Neighboring gene glutamate-cysteine ligase, catalytic subunit Neighboring gene F-box protein 9 Neighboring gene ARFGEF family member 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC63549

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    3-oxo-arachidoyl-CoA synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    3-oxo-cerotoyl-CoA synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    3-oxo-lignoceronyl-CoA synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    fatty acid elongase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    fatty acid elongase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    fatty acid elongation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    fatty acid elongation, monounsaturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    fatty acid elongation, polyunsaturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    fatty acid elongation, saturated fatty acid IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
     
    fatty acid elongation, unsaturated fatty acid IDA
    Inferred from Direct Assay
    more info
    PubMed 
    fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    long-chain fatty acid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    long-chain fatty-acyl-CoA biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    sphingolipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    unsaturated fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    very long-chain fatty acid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    very long-chain fatty acid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    dendrite IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    elongation of very long chain fatty acids protein 5
    Names
    ELOVL family member 5, elongation of long chain fatty acids
    NP_956747.1
    XP_005156547.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200453.2NP_956747.1  elongation of very long chain fatty acids protein 5

      See identical proteins and their annotated locations for NP_956747.1

      Status: VALIDATED

      Source sequence(s)
      CR376766, EH446014
      UniProtKB/TrEMBL
      Q8AX86
      Related
      ENSDARP00000027516.4, OTTDARP00000021275, ENSDART00000006990.6, OTTDART00000025894
      Conserved Domains (1) summary
      pfam01151
      Location:27262
      ELO; GNS1/SUR4 family

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      2394197..2417402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005156490.4XP_005156547.1  elongation of very long chain fatty acids protein 5 isoform X1

      See identical proteins and their annotated locations for XP_005156547.1

      UniProtKB/TrEMBL
      Q8AX86
      Conserved Domains (1) summary
      pfam01151
      Location:27262
      ELO; GNS1/SUR4 family
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