Format

Send to:

Choose Destination
    • Showing Current items.

    csnk1a1.S casein kinase 1 alpha 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380238, updated on 16-Apr-2018

    Summary

    Official Symbol
    csnk1a1.S
    Official Full Name
    casein kinase 1 alpha 1 S homeolog
    Primary source
    Xenbase:XB-GENE-17345862
    Locus tag
    XELAEV_18021437mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ck1; csnk1a1

    Genomic context

    See csnk1a1.S in Genome Data Viewer
    Location:
    chromosome: 3S
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (104757705..104795526, complement)

    Chromosome 3S - NC_030729.1Genomic Context describing neighboring genes Neighboring gene GrpE like 2, mitochondrial S homeolog Neighboring gene interleukin-17B-like Neighboring gene uncharacterized LOC108713255 Neighboring gene serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030729.1 Chromosome 3S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Hedgehog signaling pathway, organism-specific biosystem (from KEGG)
      Hedgehog signaling pathway, organism-specific biosystemThe Hedgehog (Hh) signaling pathway has numerous roles in the control of cell proliferation, tissue patterning, stem cell maintenance and development. The primary cilium is an important center for tr...
    • Hedgehog signaling pathway, conserved biosystem (from KEGG)
      Hedgehog signaling pathway, conserved biosystemThe Hedgehog (Hh) signaling pathway has numerous roles in the control of cell proliferation, tissue patterning, stem cell maintenance and development. The primary cilium is an important center for tr...
    • Wnt signaling pathway, organism-specific biosystem (from KEGG)
      Wnt signaling pathway, organism-specific biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...
    • Wnt signaling pathway, conserved biosystem (from KEGG)
      Wnt signaling pathway, conserved biosystemWnt proteins are secreted morphogens that are required for basic developmental processes, such as cell-fate specification, progenitor-cell proliferation and the control of asymmetric cell division, i...

    General protein information

    Preferred Names
    casein kinase 1 alpha 1 S homeolog; casein kinase 1, alpha 1
    Names
    ck1 alpha
    NP_001080546.1
    XP_018109561.1
    XP_018109562.1
    XP_018109563.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001087077.1NP_001080546.1  casein kinase 1 alpha 1 S homeolog

      See identical proteins and their annotated locations for NP_001080546.1

      Status: PROVISIONAL

      Source sequence(s)
      BC043956
      UniProtKB/TrEMBL
      Q7ZY65
      Conserved Domains (2) summary
      COG0515
      Location:16239
      SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
      cd14128
      Location:16281
      STKc_CK1_alpha; Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 alpha

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030729.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      104757705..104795526 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018254074.1XP_018109563.1  casein kinase 1, alpha 1 isoform X3

    2. XM_018254072.1XP_018109561.1  casein kinase 1, alpha 1 isoform X1

      UniProtKB/TrEMBL
      A0A1L8GV61
    3. XM_018254073.1XP_018109562.1  casein kinase 1, alpha 1 isoform X2

    Support Center