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    clic5.S chloride intracellular channel 5 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 380025, updated on 2-May-2018

    Summary

    Symbol
    clic5.S
    Full Name
    chloride intracellular channel 5 S homeolog
    Primary source
    Xenbase:XB-GENE-6488882
    Locus tag
    XELAEV_18030160mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    clic5; clic6; clic6.L

    Genomic context

    See clic5.S in Genome Data Viewer
    Location:
    chromosome: 5S
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (127874054..127921489)

    Chromosome 5S - NC_030733.1Genomic Context describing neighboring genes Neighboring gene regulator of calcineurin 2 S homeolog Neighboring gene tripartite motif containing 62 L homeolog Neighboring gene runt-related transcription factor 2-like Neighboring gene cell division cycle 5 like S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030733.1 Chromosome 5S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    chloride intracellular channel 5 S homeolog
    Names
    chloride intracellular channel 5
    chloride intracellular channel 6 L homeolog
    NP_001080333.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086864.1NP_001080333.1  chloride intracellular channel 5 S homeolog

      See identical proteins and their annotated locations for NP_001080333.1

      Status: PROVISIONAL

      Source sequence(s)
      BC056036
      UniProtKB/TrEMBL
      Q7T0U3
      Conserved Domains (3) summary
      TIGR00862
      Location:14249
      O-ClC; intracellular chloride channel protein
      cd10297
      Location:108248
      GST_C_CLIC5; C-terminal, alpha helical domain of Chloride Intracellular Channel 5
      cd03061
      Location:11101
      GST_N_CLIC; GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated ...

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030733.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      127874054..127921489
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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