Format

Send to:

Choose Destination
    • Showing Current items.

    ddit4.S DNA damage inducible transcript 4 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379481, updated on 27-Jan-2018

    Summary

    Symbol
    ddit4.S
    Full Name
    DNA damage inducible transcript 4 S homeolog
    Primary source
    Xenbase:XB-GENE-944281
    Locus tag
    XELAEV_18037099mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ddit4; redd1

    Genomic context

    See ddit4.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (28483671..28486601, complement)

    Chromosome 7S - NC_030737.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uptake 1 S homeolog Neighboring gene DnaJ heat shock protein family (Hsp40) member B12 S homeolog Neighboring gene uncharacterized LOC108697485 Neighboring gene anaphase promoting complex subunit 16 S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030737.1 Chromosome 7S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Autophagy - animal, organism-specific biosystem (from KEGG)
      Autophagy - animal, organism-specific biosystemAutophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily cons...
    • Autophagy - animal, conserved biosystem (from KEGG)
      Autophagy - animal, conserved biosystemAutophagy (or macroautophagy) is a cellular catabolic pathway involving in protein degradation, organelle turnover, and non-selective breakdown of cytoplasmic components, which is evolutionarily cons...
    • mTOR signaling pathway, organism-specific biosystem (from KEGG)
      mTOR signaling pathway, organism-specific biosystemThe mammalian (mechanistic) target of rapamycin (mTOR) is a highly conserved serine/threonine protein kinase, which exists in two complexes termed mTOR complex 1 (mTORC1) and 2 (mTORC2). mTORC1 conta...
    • mTOR signaling pathway, conserved biosystem (from KEGG)
      mTOR signaling pathway, conserved biosystemThe mammalian (mechanistic) target of rapamycin (mTOR) is a highly conserved serine/threonine protein kinase, which exists in two complexes termed mTOR complex 1 (mTORC1) and 2 (mTORC2). mTORC1 conta...

    General protein information

    Preferred Names
    DNA damage-inducible transcript 4 protein
    Names
    REDD-1
    protein regulated in development and DNA damage response 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086322.1NP_001079791.1  DNA damage-inducible transcript 4 protein

      See identical proteins and their annotated locations for NP_001079791.1

      Status: PROVISIONAL

      Source sequence(s)
      BC054246
      UniProtKB/Swiss-Prot
      Q7SYV9
      UniProtKB/TrEMBL
      A0A1L8FF07
      Conserved Domains (1) summary
      pfam07809
      Location:94210
      RTP801_C; RTP801 C-terminal region

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030737.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      28483671..28486601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center