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    fbxl2 F-box and leucine-rich repeat protein 2 [ Danio rerio (zebrafish) ]

    Gene ID: 378737, updated on 9-Sep-2018

    Summary

    Official Symbol
    fbxl2provided by ZNC
    Official Full Name
    F-box and leucine-rich repeat protein 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030925-12
    See related
    Ensembl:ENSDARG00000012135 Vega:OTTDARG00000015702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    fbxl20; sb:cb783; zgc:73374
    Orthologs

    Genomic context

    See fbxl2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (42660197..42682947)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (43090760..43113510)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene cartilage associated protein Neighboring gene uncharacterized LOC103909275 Neighboring gene sushi domain containing 5 Neighboring gene cytoplasmic linker associated protein 2 Neighboring gene upstream binding protein 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    contributes_to ubiquitin-protein transferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ubiquitin-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    SCF ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    F-box/LRR-repeat protein 2
    Names
    F-box and leucine-rich repeat protein 20

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200106.1NP_956400.1  F-box/LRR-repeat protein 2

      See identical proteins and their annotated locations for NP_956400.1

      Status: PROVISIONAL

      Source sequence(s)
      BC059683
      UniProtKB/TrEMBL
      Q6PBJ7
      Related
      ENSDARP00000018003.5, OTTDARP00000015893, ENSDART00000018328.6, OTTDART00000018814
      Conserved Domains (3) summary
      cd09293
      Location:63284
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:115140
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam12937
      Location:2466
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      42660197..42682947
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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