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    RPS3 ribosomal protein S3 [ Bos taurus (cattle) ]

    Gene ID: 326588, updated on 2-Oct-2018

    Summary

    Official Symbol
    RPS3provided by VGNC
    Official Full Name
    ribosomal protein S3provided by VGNC
    Primary source
    VGNC:VGNC:34138
    See related
    BGD:BT20485; Ensembl:ENSBTAG00000005620
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See RPS3 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 15 NC_037342.1 (54593637..54598582)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 15 AC_000172.1 (55370367..55375312)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene trophoblast glycoprotein like Neighboring gene arrestin beta 1 Neighboring gene microRNA 326 Neighboring gene small nucleolar RNA SNORD15 Neighboring gene small nucleolar RNA SNORD15 Neighboring gene uncharacterized LOC112441642 Neighboring gene kelch like family member 35 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 5

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC127206

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Hsp90 protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    RNA polymerase II regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    class I DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
     
    endodeoxyribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule binding IEA
    Inferred from Electronic Annotation
    more info
     
    oxidized pyrimidine DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase A binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    small ribosomal subunit rRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    supercoiled DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin-like protein conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    DNA damage response, detection of DNA damage IEA
    Inferred from Electronic Annotation
    more info
     
    apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to hydrogen peroxide IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to tumor necrosis factor IEA
    Inferred from Electronic Annotation
    more info
     
    chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of JUN kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of NF-kappaB transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of NIK/NF-kappaB signaling IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of T cell receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of activated T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of base-excision repair IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of endodeoxyribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of interleukin-2 production IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of microtubule polymerization IEA
    Inferred from Electronic Annotation
    more info
     
    response to TNF agonist IEA
    Inferred from Electronic Annotation
    more info
     
    spindle assembly IEA
    Inferred from Electronic Annotation
    more info
     
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    NF-kappaB complex IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
     
    mitotic spindle IEA
    Inferred from Electronic Annotation
    more info
     
    nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    polysome IEA
    Inferred from Electronic Annotation
    more info
     
    postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
     
    ribonucleoprotein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    ruffle membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    40S ribosomal protein S3
    NP_001029219.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034047.1NP_001029219.1  40S ribosomal protein S3

      See identical proteins and their annotated locations for NP_001029219.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102090
      UniProtKB/Swiss-Prot
      Q3T169
      Related
      ENSBTAP00000003962.5, ENSBTAT00000003962.5
      Conserved Domains (1) summary
      PTZ00084
      Location:4216
      PTZ00084; 40S ribosomal protein S3; Provisional

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      54593637..54598582
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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