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    arl4d ADP-ribosylation factor-like 4D [ Danio rerio (zebrafish) ]

    Gene ID: 323573, updated on 14-Feb-2019

    Summary

    Official Symbol
    arl4dprovided by ZNC
    Official Full Name
    ADP-ribosylation factor-like 4Dprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-2293
    See related
    Ensembl:ENSDARG00000045074
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    fc03d05; zgc:77741; wu:fc03d05
    Orthologs

    Genomic context

    See arl4d in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (27243059..27245760)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (27151699..27154400)
    103 previous assembly Zv9 (GCF_000002035.4) 12 NC_007123.5 (28814225..28816788)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene NBR1 autophagy cargo receptor a Neighboring gene uncharacterized LOC110440144 Neighboring gene transmembrane protein 106A Neighboring gene dual specificity phosphatase 3a Neighboring gene sclerostin

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    ADP-ribosylation factor-like protein 4D

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199644.2NP_955938.1  ADP-ribosylation factor-like protein 4D

      See identical proteins and their annotated locations for NP_955938.1

      Status: VALIDATED

      Source sequence(s)
      BX001014, EH436885, EH549389
      UniProtKB/TrEMBL
      Q6P5L0
      Related
      ENSDARP00000066268.4, ENSDART00000066269.5
      Conserved Domains (2) summary
      cd04152
      Location:18200
      Arl4_Arl7; Arf-like 4 (Arl4) and 7 (Arl7) GTPases
      TIGR00231
      Location:23188
      small_GTP; small GTP-binding protein domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      27243059..27245760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394847.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      146925..149627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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