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    Gemin4 gem nuclear organelle associated protein 4 [ Mus musculus (house mouse) ]

    Gene ID: 276919, updated on 23-May-2018

    Summary

    Official Symbol
    Gemin4provided by MGI
    Official Full Name
    gem nuclear organelle associated protein 4provided by MGI
    Primary source
    MGI:MGI:2449313
    See related
    Ensembl:ENSMUSG00000049396 Vega:OTTMUSG00000006230
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AU015359; 4932415L08Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 14.9), mammary gland adult (RPKM 7.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See Gemin4 in Genome Data Viewer
    Location:
    11; 11 B5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (76210571..76217572, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (76024073..76031074, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene VPS53 GARP complex subunit Neighboring gene predicted gene, 46252 Neighboring gene uncharacterized LOC108167850 Neighboring gene family with sequence similarity 57, member A Neighboring gene diazepam binding inhibitor-like 5 Neighboring gene glyoxalase domain containing 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC28146

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ribonucleoprotein complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    spliceosomal snRNP assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    spliceosomal snRNP assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Cajal body ISO
    Inferred from Sequence Orthology
    more info
     
    SMN complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    SMN complex ISO
    Inferred from Sequence Orthology
    more info
     
    SMN-Sm protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    SMN-Sm protein complex ISO
    Inferred from Sequence Orthology
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177367.3NP_796341.2  gem-associated protein 4

      See identical proteins and their annotated locations for NP_796341.2

      Status: VALIDATED

      Source sequence(s)
      AL591129
      Consensus CDS
      CCDS25061.1
      UniProtKB/TrEMBL
      Q6P6L6
      Related
      ENSMUSP00000099558.4, OTTMUSP00000006534, ENSMUST00000102500.4, OTTMUST00000014065

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      76210571..76217572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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