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    Prokr1 prokineticin receptor 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 192648, updated on 2-Oct-2018

    Summary

    Official Symbol
    Prokr1provided by RGD
    Official Full Name
    prokineticin receptor 1provided by RGD
    Primary source
    RGD:708443
    See related
    Ensembl:ENSRNOG00000009556
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Gpr73
    Summary
    G protein-coupled receptor for prokineticin [RGD, Feb 2006]
    Expression
    Biased expression in Spleen (RPKM 34.3), Kidney (RPKM 7.2) and 4 other tissues See more
    Orthologs

    Genomic context

    See Prokr1 in Genome Data Viewer
    Location:
    4q34
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (119375790..119386551, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 4 NC_005103.3 (183939201..183949822, complement)

    Chromosome 4 - NC_005103.4Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 10 Neighboring gene Rho GTPase activating protein 25 Neighboring gene vomeronasal 1 receptor 101 Neighboring gene vomeronasal 1 receptor 102

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    G protein-coupled receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuropeptide Y receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    circadian rhythm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    negative regulation of apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    prokineticin receptor 1
    Names
    G protein-coupled receptor 73
    G protein-coupled receptor ZAQ
    PK-R1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138977.1NP_620433.1  prokineticin receptor 1

      See identical proteins and their annotated locations for NP_620433.1

      Status: PROVISIONAL

      Source sequence(s)
      AY089974
      UniProtKB/Swiss-Prot
      Q8R416
      Conserved Domains (1) summary
      pfam00001
      Location:79338
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

      Range
      119375790..119386551 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006236821.3XP_006236883.1  prokineticin receptor 1 isoform X1

      See identical proteins and their annotated locations for XP_006236883.1

      UniProtKB/Swiss-Prot
      Q8R416
      Related
      ENSRNOP00000012913.1, ENSRNOT00000012913.3
      Conserved Domains (1) summary
      pfam00001
      Location:79338
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    Alternate Rn_Celera

    Genomic

    1. AC_000072.1 Alternate Rn_Celera

      Range
      108992288..108999753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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