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    Cd300c2 CD300C molecule 2 [ Mus musculus (house mouse) ]

    Gene ID: 140497, updated on 5-Aug-2018

    Summary

    Official Symbol
    Cd300c2provided by MGI
    Official Full Name
    CD300C molecule 2provided by MGI
    Primary source
    MGI:MGI:2153249
    See related
    Ensembl:ENSMUSG00000044811 Vega:OTTMUSG00000003604
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CLM4; DIgR1; Igsf7; Lmir2; Cd300c; Cd300d; MAIR-II
    Expression
    Broad expression in spleen adult (RPKM 14.8), lung adult (RPKM 8.8) and 22 other tissues See more

    Genomic context

    See Cd300c2 in Genome Data Viewer
    Location:
    11 E2; 11 80.57 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (114996769..115001880, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (114858083..114863194, complement)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene CD300C molecule Neighboring gene CD300 molecule like family member d Neighboring gene CD300 molecule like family member D4 Neighboring gene CD300 molecule like family member D2 Neighboring gene CD300 molecule like family member D5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    immune system process IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cytokine secretion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    CMRF35-like molecule
    Names
    CLM
    Cd300C antigen
    Cd300D antigen
    MAIR-2
    dendritic cell-derived Ig-like receptor 1
    dendritic cell-derived immunoglobulin receptor 1
    immunoglobulin superfamily, member 7
    leukocyte mono-Ig-like receptor 2
    myeloid-associated immunoglobulin-like receptor 2
    myeloid-associated immunoglobulin-like receptor II

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134158.1NP_598919.1  CMRF35-like molecule precursor

      See identical proteins and their annotated locations for NP_598919.1

      Status: PROVISIONAL

      Source sequence(s)
      AY048685
      Consensus CDS
      CCDS25616.1
      UniProtKB/Swiss-Prot
      Q7TSN2
      Related
      ENSMUSP00000090121.3, OTTMUSP00000003769, ENSMUST00000092464.9, OTTMUST00000007758
      Conserved Domains (2) summary
      cd05716
      Location:30119
      Ig_pIgR; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)
      smart00410
      Location:28120
      IG_like; Immunoglobulin like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      114996769..115001880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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