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    Cct3 chaperonin containing Tcp1, subunit 3 (gamma) [ Mus musculus (house mouse) ]

    Gene ID: 12462, updated on 9-Sep-2018

    Summary

    Official Symbol
    Cct3provided by MGI
    Official Full Name
    chaperonin containing Tcp1, subunit 3 (gamma)provided by MGI
    Primary source
    MGI:MGI:104708
    See related
    Ensembl:ENSMUSG00000001416 Vega:OTTMUSG00000035166
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cctg; TriC-P5; AL024092; Tcp1-rs3
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 119.9), placenta adult (RPKM 98.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cct3 in Genome Data Viewer
    Location:
    3 F1; 3 38.79 cM
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (88297135..88321766)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (88101057..88125688)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene Rhesus blood group-associated B glycoprotein Neighboring gene TSSK6 activating co-chaperone Neighboring gene glycosylated lysosomal membrane protein Neighboring gene transmembrane protein 79

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Transgenic (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    binding of sperm to zona pellucida IDA
    Inferred from Direct Assay
    more info
    PubMed 
    pore complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of establishment of protein localization to telomere ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of telomere maintenance via telomerase ISO
    Inferred from Sequence Orthology
    more info
     
    protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    toxin transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chaperonin-containing T-complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    chaperonin-containing T-complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chaperonin-containing T-complex ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    myelin sheath IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    zona pellucida receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    T-complex protein 1 subunit gamma
    Names
    CCT-gamma
    TCP-1-gamma
    chaperonin subunit 3 (gamma)
    matricin

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009836.1NP_033966.1  T-complex protein 1 subunit gamma

      See identical proteins and their annotated locations for NP_033966.1

      Status: PROVISIONAL

      Source sequence(s)
      Z31556
      Consensus CDS
      CCDS17468.1
      UniProtKB/Swiss-Prot
      P80318
      UniProtKB/TrEMBL
      Q3U4U6
      Related
      ENSMUSP00000001452.7, OTTMUSP00000048968, ENSMUST00000001452.13, OTTMUST00000089567
      Conserved Domains (2) summary
      cd03337
      Location:6525
      TCP1_gamma; TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins ...
      TIGR02344
      Location:6529
      chap_CCT_gamma; T-complex protein 1, gamma subunit

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      88297135..88321766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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