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    Adra1d adrenergic receptor, alpha 1d [ Mus musculus (house mouse) ]

    Gene ID: 11550, updated on 18-Sep-2018

    Summary

    Official Symbol
    Adra1dprovided by MGI
    Official Full Name
    adrenergic receptor, alpha 1dprovided by MGI
    Primary source
    MGI:MGI:106673
    See related
    Ensembl:ENSMUSG00000027335 Vega:OTTMUSG00000016190
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Spr8; Adra1; Gpcr8; [a]1d; Adra-1; Adra1a; alpha1D-AR
    Expression
    Biased expression in adrenal adult (RPKM 24.0), cortex adult (RPKM 9.4) and 10 other tissues See more
    Orthologs

    Genomic context

    See Adra1d in Genome Data Viewer
    Location:
    2 F1; 2 63.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (131545357..131562285, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (131371093..131388021, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene spermine oxidase Neighboring gene predicted gene, 30732 Neighboring gene predicted gene, 39938 Neighboring gene predicted gene 14285 Neighboring gene predicted gene, 30986 Neighboring gene RIKEN cDNA 5330413P13 gene Neighboring gene chromosome segregation 1-like pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    adrenergic receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    alpha1-adrenergic receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    alpha1-adrenergic receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    alpha-1D adrenergic receptor
    Names
    alpha-1A adrenergic receptor
    alpha-1D adrenoceptor
    alpha-1D adrenoreceptor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013460.4NP_038488.4  alpha-1D adrenergic receptor

      See identical proteins and their annotated locations for NP_038488.4

      Status: VALIDATED

      Source sequence(s)
      AL831731
      Consensus CDS
      CCDS16764.1
      UniProtKB/TrEMBL
      A2ANQ2
      Related
      ENSMUSP00000099473.3, OTTMUSP00000017337, ENSMUST00000103184.3, OTTMUST00000038773
      Conserved Domains (2) summary
      cd14964
      Location:93117
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:91407
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      131545357..131562285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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