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    FNDC5 fibronectin type III domain containing 5 [ Ovis aries (sheep) ]

    Gene ID: 101104971, updated on 5-Dec-2017

    Summary

    Gene symbol
    FNDC5
    Gene description
    fibronectin type III domain containing 5
    See related
    Ensembl:ENSOARG00000020884
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs

    Genomic context

    See FNDC5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Oar_v4.0 (GCF_000298735.2) 2 NC_019459.2 (233893817..233901917)
    101 previous assembly Oar_v3.1 (GCF_000298735.1) 2 NC_019459.1 (233889062..233902203)

    Chromosome 2 - NC_019459.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 54 Neighboring gene hippocalcin Neighboring gene 60S ribosomal protein L22 pseudogene Neighboring gene S100P binding protein Neighboring gene tyrosyl-tRNA synthetase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sheep Tissue Atlas
    • Description: Sheep total RNA was extracted from embryonic and adult tissues
    • BioProject: PRJEB6169
    • Publication: PMID 24904168
    • Analysis date: Mon Jan 29 09:33:46 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    fibronectin type III domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ovis aries Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oar_v4.0 Primary Assembly

    Genomic

    1. NC_019459.2 Reference Oar_v4.0 Primary Assembly

      Range
      233893817..233901917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015093613.1XP_014949099.1  fibronectin type III domain-containing protein 5 isoform X1

      Conserved Domains (2) summary
      cd00063
      Location:26116
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:141164
      DUF4808; Domain of unknown function (DUF4808)
    2. XM_015093615.1XP_014949101.1  fibronectin type III domain-containing protein 5 isoform X3

      Conserved Domains (2) summary
      cd00063
      Location:26116
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:141164
      DUF4808; Domain of unknown function (DUF4808)
    3. XM_015093614.1XP_014949100.1  fibronectin type III domain-containing protein 5 isoform X2

      Conserved Domains (2) summary
      cd00063
      Location:26116
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:141164
      DUF4808; Domain of unknown function (DUF4808)

    Alternate Oori1

    Genomic

    1. NW_011942477.1 Alternate Oori1

      Range
      2685403..2693490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012141267.2XP_011996657.1  fibronectin type III domain-containing protein 5 isoform X1

      Conserved Domains (2) summary
      cd00063
      Location:27117
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:142165
      DUF4808; Domain of unknown function (DUF4808)
    2. XM_012141271.1XP_011996661.1  fibronectin type III domain-containing protein 5 isoform X3

      Conserved Domains (2) summary
      cd00063
      Location:27117
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:142165
      DUF4808; Domain of unknown function (DUF4808)
    3. XM_012141268.1XP_011996658.1  fibronectin type III domain-containing protein 5 isoform X2

      Conserved Domains (2) summary
      cd00063
      Location:27117
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam16066
      Location:142165
      DUF4808; Domain of unknown function (DUF4808)
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