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    GATA4 GATA binding protein 4 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100602105, updated on 19-Jan-2018

    Summary

    Gene symbol
    GATA4
    Gene description
    GATA binding protein 4
    See related
    Ensembl:ENSNLEG00000015042
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs

    Genomic context

    See GATA4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current Nleu_3.0 (GCF_000146795.2) 4 NC_019819.1 (141537188..141593179, complement)

    Chromosome 4 - NC_019819.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein C8orf49 Neighboring gene nei like DNA glycosylase 2 Neighboring gene uncharacterized LOC105740819 Neighboring gene uncharacterized LOC105740575 Neighboring gene BLK proto-oncogene, Src family tyrosine kinase

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_019819.1 Chromosome 4 Reference Nleu_3.0

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Thyroid hormone signaling pathway, organism-specific biosystem (from KEGG)
      Thyroid hormone signaling pathway, organism-specific biosystemThe thyroid hormones (THs) are important regulators of growth, development and metabolism. The action of TH is mainly mediated by T3 (3,5,3'-triiodo-L-thyronine). Thyroid hormones, L-thyroxine (T4) a...
    • Tight junction, organism-specific biosystem (from KEGG)
      Tight junction, organism-specific biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...
    • Tight junction, conserved biosystem (from KEGG)
      Tight junction, conserved biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...
    • cGMP-PKG signaling pathway, organism-specific biosystem (from KEGG)
      cGMP-PKG signaling pathway, organism-specific biosystemCyclic GMP (cGMP) is the intracellular second messenger that mediates the action of nitric oxide (NO) and natriuretic peptides (NPs), regulating a broad array of physiologic processes. The elevated i...
    • cGMP-PKG signaling pathway, conserved biosystem (from KEGG)
      cGMP-PKG signaling pathway, conserved biosystemCyclic GMP (cGMP) is the intracellular second messenger that mediates the action of nitric oxide (NO) and natriuretic peptides (NPs), regulating a broad array of physiologic processes. The elevated i...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    transcription factor GATA-4

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nleu_3.0

    Genomic

    1. NC_019819.1 Reference Nleu_3.0

      Range
      141537188..141593179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003271438.3XP_003271486.1  transcription factor GATA-4 isoform X2

      Related
      ENSNLEP00000035338.1, ENSNLET00000041279.1
      Conserved Domains (3) summary
      smart00401
      Location:268315
      ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
      cd00202
      Location:270321
      ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
      pfam05349
      Location:1205
      GATA-N; GATA-type transcription activator, N-terminal
    2. XM_012511141.1XP_012366595.1  transcription factor GATA-4 isoform X1

      UniProtKB/TrEMBL
      G1RYG7
      Related
      ENSNLEP00000018294.1, ENSNLET00000019203.2
      Conserved Domains (3) summary
      smart00401
      Location:269316
      ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
      cd00202
      Location:271322
      ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
      pfam05349
      Location:1205
      GATA-N; GATA-type transcription activator, N-terminal
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