Format

Send to:

Choose Destination
    • Showing Current items.

    POGZ pogo transposable element derived with ZNF domain [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100592385, updated on 19-Jan-2018

    Summary

    Gene symbol
    POGZ
    Gene description
    pogo transposable element derived with ZNF domain
    See related
    Ensembl:ENSNLEG00000010214
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs

    Genomic context

    See POGZ in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (50735004..50779396)

    Chromosome 12 - NC_019827.1Genomic Context describing neighboring genes Neighboring gene tuftelin 1 Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene cingulin Neighboring gene proteasome subunit beta 4 Neighboring gene selenium binding protein 1 Neighboring gene uncharacterized LOC105740603 Neighboring gene regulatory factor X5

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_019827.1 Chromosome 12 Reference Nleu_3.0

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    General protein information

    Preferred Names
    pogo transposable element with ZNF domain

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nleu_3.0

    Genomic

    1. NC_019827.1 Reference Nleu_3.0

      Range
      50735004..50779396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003259233.1XP_003259281.1  pogo transposable element with ZNF domain isoform X1

      Related
      ENSNLEP00000024147.2, ENSNLET00000032515.2
      Conserved Domains (4) summary
      smart00674
      Location:10121073
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      sd00017
      Location:523544
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:487520
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl21549
      Location:11471271
      rve; Integrase core domain
    2. XM_003259234.1XP_003259282.1  pogo transposable element with ZNF domain isoform X2

      Related
      ENSNLEP00000012464.2, ENSNLET00000013072.2
      Conserved Domains (4) summary
      smart00674
      Location:9591020
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      sd00017
      Location:470491
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:434467
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl21549
      Location:10941218
      rve; Integrase core domain
    3. XM_012511286.1XP_012366740.1  pogo transposable element with ZNF domain isoform X3

      Related
      ENSNLEP00000024868.1, ENSNLET00000045703.1
      Conserved Domains (5) summary
      smart00674
      Location:926987
      CENPB; Putative DNA-binding domain in centromere protein B, mouse jerky and transposases
      PLN02983
      Location:176367
      PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
      sd00017
      Location:437458
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:401434
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl21549
      Location:10611185
      rve; Integrase core domain
    Support Center