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    htra1 HtrA serine peptidase 1 [ Anolis carolinensis (green anole) ]

    Gene ID: 100564246, updated on 24-May-2019

    Summary

    Gene symbol
    htra1
    Gene description
    HtrA serine peptidase 1
    See related
    Ensembl:ENSACAG00000017367
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs

    Genomic context

    See htra1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current AnoCar2.0 (GCF_000090745.1) 3 NC_014778.1 (63892301..63944873, complement)

    Chromosome 3 - NC_014778.1Genomic Context describing neighboring genes Neighboring gene deleted in malignant brain tumors 1 protein Neighboring gene deleted in malignant brain tumors 1 protein Neighboring gene deleted in malignant brain tumors 1 protein Neighboring gene pleckstrin homology domain containing A1 Neighboring gene BTB domain containing 16

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_014778.1 Chromosome 3 Reference AnoCar2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Anolis carolinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AnoCar2.0 Primary Assembly

    Genomic

    1. NC_014778.1 Reference AnoCar2.0 Primary Assembly

      Range
      63892301..63944873 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003218617.3XP_003218665.1  serine protease HTRA1

      UniProtKB/TrEMBL
      G1KTV2
      Related
      ENSACAP00000017127.3, ENSACAT00000017464.3
      Conserved Domains (5) summary
      smart00121
      Location:29112
      IB; Insulin growth factor-binding protein homologues
      COG0265
      Location:147480
      DegQ; Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
      cd00104
      Location:115156
      KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
      cd00987
      Location:383474
      PDZ_serine_protease; PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind ...
      pfam13365
      Location:205343
      Trypsin_2; Trypsin-like peptidase domain
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