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    galnt13 polypeptide N-acetylgalactosaminyltransferase 13 [ Anolis carolinensis (green anole) ]

    Gene ID: 100559679, updated on 24-May-2019

    Summary

    Gene symbol
    galnt13
    Gene description
    polypeptide N-acetylgalactosaminyltransferase 13
    See related
    Ensembl:ENSACAG00000012427
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs

    Genomic context

    See galnt13 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338843.1 (248136..508903, complement)

    NW_003338843.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103280046 Neighboring gene G protein-activated inward rectifier potassium channel 1 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene reprimo, TP53 dependent G2 arrest mediator homolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003338843.1 Unplaced Scaffold Reference AnoCar2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 13
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Anolis carolinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AnoCar2.0 Primary Assembly

    Genomic

    1. NW_003338843.1 Reference AnoCar2.0 Primary Assembly

      Range
      248136..508903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003225380.3XP_003225428.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

      Conserved Domains (3) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:431549
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      pfam00652
      Location:431547
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    2. XM_008117706.2XP_008115913.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

      UniProtKB/TrEMBL
      H9GIY9
      Related
      ENSACAP00000012259.3, ENSACAT00000012510.3
      Conserved Domains (3) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:431550
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      pfam00652
      Location:431548
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    3. XM_008117708.2XP_008115915.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

      Conserved Domains (3) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:431511
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      pfam00652
      Location:431508
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
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