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    ube2n ubiquitin conjugating enzyme E2 N [ Ictalurus punctatus (channel catfish) ]

    Gene ID: 100528331, updated on 3-Nov-2018

    Summary

    Gene symbol
    ube2n
    Gene description
    ubiquitin conjugating enzyme E2 N
    See related
    Ensembl:ENSIPUG00000017236
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ictalurus punctatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Orthologs

    Genomic context

    See ube2n in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current IpCoco_1.2 (GCF_001660625.1) 4 NC_030419.1 (10432543..10446953)

    Chromosome 4 - NC_030419.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108263942 Neighboring gene complement C1q tumor necrosis factor-related protein 4-like Neighboring gene nudix hydrolase 4 Neighboring gene early endosome antigen 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030419.1 Chromosome 4 Reference IpCoco_1.2 Primary Assembly

    Pathways from BioSystems

    • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
      Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
    • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
      Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...

    General protein information

    Preferred Names
    ubiquitin-conjugating enzyme E2 N
    NP_001187530.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001200601.1NP_001187530.1  ubiquitin-conjugating enzyme E2 N

      See identical proteins and their annotated locations for NP_001187530.1

      Status: PROVISIONAL

      Source sequence(s)
      GU588820
      UniProtKB/TrEMBL
      E3TEN8
      Related
      ENSIPUP00000025480.1, ENSIPUT00000026535.1
      Conserved Domains (1) summary
      cl00154
      Location:4151
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

    RefSeqs of Annotated Genomes: Ictalurus punctatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IpCoco_1.2 Primary Assembly

    Genomic

    1. NC_030419.1 Reference IpCoco_1.2 Primary Assembly

      Range
      10432543..10446953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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