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    pasd1 PAS domain containing 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486786, updated on 20-Jun-2018

    Summary

    Official Symbol
    pasd1provided by Xenbase
    Official Full Name
    PAS domain containing 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1033070
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See pasd1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (37317911..37398164)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668241.1 (32101689..32177960, complement)

    Chromosome 8 - NC_030684.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105948264 Neighboring gene melatonin receptor type 1C Neighboring gene VMA21, vacuolar ATPase assembly factor Neighboring gene TBC1 domain family member 8B Neighboring gene ring finger protein 128, E3 ubiquitin protein ligase

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    circadian clock protein PASD1
    Names
    circadian locomoter output cycles protein kaput-like

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030684.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      37317911..37398164
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018096345.1XP_017951834.1  circadian clock protein PASD1

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