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    CRY1 cryptochrome circadian regulator 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100484388, updated on 4-Oct-2017

    Summary

    Gene symbol
    CRY1
    Gene description
    cryptochrome circadian regulator 1
    Locus tag
    PANDA_017512
    See related
    Ensembl:ENSAMEG00000002720
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs

    Genomic context

    See CRY1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218604.1 (420763..517591)

    NW_003218604.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and BTB/POZ domain-containing protein BTBD11-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene transmembrane protein 263

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003218604.1 Unplaced Scaffold Reference AilMel_1.0 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Circadian rhythm, organism-specific biosystem (from KEGG)
      Circadian rhythm, organism-specific biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In mammals, the circadian clock mechanism consists of ...
    • Circadian rhythm, conserved biosystem (from KEGG)
      Circadian rhythm, conserved biosystemCircadian rhythm is an internal biological clock, which enables to sustain an approximately 24-hour rhythm in the absence of environmental cues. In mammals, the circadian clock mechanism consists of ...

    General protein information

    Preferred Names
    cryptochrome-1
    Names
    cryptochrome 1 (photolyase-like)
    cryptochrome circadian clock 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AilMel_1.0 Primary Assembly

    Genomic

    1. NW_003218604.1 Reference AilMel_1.0 Primary Assembly

      Range
      420763..517591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002927658.3XP_002927704.1  cryptochrome-1

      See identical proteins and their annotated locations for XP_002927704.1

      UniProtKB/TrEMBL
      D2HXW9
      Related
      ENSAMEP00000002891.1, ENSAMET00000003013.1
      Conserved Domains (3) summary
      COG0415
      Location:6491
      PhrB; Deoxyribodipyrimidine photolyase [Replication, recombination and repair]
      pfam00875
      Location:5153
      DNA_photolyase; DNA photolyase
      pfam03441
      Location:213486
      FAD_binding_7; FAD binding domain of DNA photolyase
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