Format

Send to:

Choose Destination
    • Showing Current items.

    PTPN1 protein tyrosine phosphatase, non-receptor type 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100481720, updated on 3-Apr-2017

    Summary

    Gene symbol
    PTPN1
    Gene description
    protein tyrosine phosphatase, non-receptor type 1
    Locus tag
    PANDA_000795
    See related
    Ensembl:ENSAMEG00000013425
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs

    Genomic context

    See PTPN1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217301.1 (3156323..3222972, complement)

    NW_003217301.1Genomic Context describing neighboring genes Neighboring gene par-6 family cell polarity regulator beta Neighboring gene uncharacterized LOC109489624 Neighboring gene RIPOR family member 3 Neighboring gene transmembrane protein 189 Neighboring gene CCAAT enhancer binding protein beta

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003217301.1 Unplaced Scaffold Reference AilMel_1.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Adherens junction, organism-specific biosystem (from KEGG)
      Adherens junction, organism-specific biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
    • Adherens junction, conserved biosystem (from KEGG)
      Adherens junction, conserved biosystemCell-cell adherens junctions (AJs), the most common type of intercellular adhesions, are important for maintaining tissue architecture and cell polarity and can limit cell movement and proliferation....
    • Insulin resistance, organism-specific biosystem (from KEGG)
      Insulin resistance, organism-specific biosystemInsulin resistance is a condition where cells become resistant to the effects of insulin. It is often found in people with health disorders, including obesity, type 2 diabetes mellitus, non-alcoholic...
    • Insulin signaling pathway, organism-specific biosystem (from KEGG)
      Insulin signaling pathway, organism-specific biosystemInsulin binding to its receptor results in the tyrosine phosphorylation of insulin receptor substrates (IRS) by the insulin receptor tyrosine kinase (INSR). This allows association of IRSs with the r...
    • Insulin signaling pathway, conserved biosystem (from KEGG)
      Insulin signaling pathway, conserved biosystemInsulin binding to its receptor results in the tyrosine phosphorylation of insulin receptor substrates (IRS) by the insulin receptor tyrosine kinase (INSR). This allows association of IRSs with the r...

    General protein information

    Preferred Names
    tyrosine-protein phosphatase non-receptor type 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AilMel_1.0 Primary Assembly

    Genomic

    1. NW_003217301.1 Reference AilMel_1.0 Primary Assembly

      Range
      3156323..3222972 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002912980.3XP_002913026.1  tyrosine-protein phosphatase non-receptor type 1

      Related
      ENSAMEP00000014156.1, ENSAMET00000014754.1
      Conserved Domains (2) summary
      smart00194
      Location:3276
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00047
      Location:43276
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Support Center