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    IKZF1 IKAROS family zinc finger 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100475874, updated on 3-Apr-2017

    Summary

    Gene symbol
    IKZF1
    Gene description
    IKAROS family zinc finger 1
    Locus tag
    PANDA_006010
    See related
    Ensembl:ENSAMEG00000008051
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs

    Genomic context

    See IKZF1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217501.1 (1094875..1191508, complement)

    NW_003217501.1Genomic Context describing neighboring genes Neighboring gene dopa decarboxylase Neighboring gene fidgetin like 1 Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene spermatogenesis associated 48 Neighboring gene 2-hydroxyacyl-CoA lyase 1 pseudogene

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003217501.1 Unplaced Scaffold Reference AilMel_1.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AilMel_1.0 Primary Assembly

    Genomic

    1. NW_003217501.1 Reference AilMel_1.0 Primary Assembly

      Range
      1094875..1191508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011222927.2XP_011221229.1  DNA-binding protein Ikaros isoform X1

      See identical proteins and their annotated locations for XP_011221229.1

      UniProtKB/TrEMBL
      G1LN57
      Conserved Domains (3) summary
      COG5048
      Location:143428
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    2. XM_019797973.1XP_019653532.1  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      G1LN57
      Related
      ENSAMEP00000008483.1, ENSAMET00000008840.1
    3. XM_011222929.2XP_011221231.1  DNA-binding protein Ikaros isoform X1

      See identical proteins and their annotated locations for XP_011221231.1

      UniProtKB/TrEMBL
      G1LN57
      Conserved Domains (3) summary
      COG5048
      Location:143428
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    4. XM_011222933.2XP_011221235.2  DNA-binding protein Ikaros isoform X6

    5. XM_011222931.2XP_011221233.2  DNA-binding protein Ikaros isoform X4

    6. XM_011222932.2XP_011221234.2  DNA-binding protein Ikaros isoform X5

    7. XM_011222925.2XP_011221227.2  DNA-binding protein Ikaros isoform X3

    8. XM_011222924.2XP_011221226.2  DNA-binding protein Ikaros isoform X2

    9. XM_002917624.3XP_002917670.3  DNA-binding protein Ikaros isoform X1

      UniProtKB/TrEMBL
      G1LN57
    10. XM_011222928.2XP_011221230.1  DNA-binding protein Ikaros isoform X1

      See identical proteins and their annotated locations for XP_011221230.1

      UniProtKB/TrEMBL
      G1LN57
      Conserved Domains (3) summary
      COG5048
      Location:143428
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    11. XM_011222926.2XP_011221228.1  DNA-binding protein Ikaros isoform X1

      See identical proteins and their annotated locations for XP_011221228.1

      UniProtKB/TrEMBL
      G1LN57
      Conserved Domains (3) summary
      COG5048
      Location:143428
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
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