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    LOC100472293 contactin-associated protein-like 4 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100472293, updated on 3-Apr-2017

    Summary

    Gene symbol
    LOC100472293
    Gene description
    contactin-associated protein-like 4
    Locus tag
    PANDA_016579
    See related
    Ensembl:ENSAMEG00000016211
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Also known as
    CNTNAP4

    Genomic context

    See LOC100472293 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    102 current AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218455.1 (211602..462015)

    NW_003218455.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003218455.1 Unplaced Scaffold Reference AilMel_1.0 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    contactin-associated protein-like 4

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AilMel_1.0 Primary Assembly

    Genomic

    1. NW_003218455.1 Reference AilMel_1.0 Primary Assembly

      Range
      211602..462015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002926822.3XP_002926868.1  contactin-associated protein-like 4

      Related
      ENSAMEP00000017205.1, ENSAMET00000017910.1
      Conserved Domains (7) summary
      smart00231
      Location:55177
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
      cd00054
      Location:962996
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00057
      Location:54176
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
      cd00110
      Location:794938
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam00008
      Location:553584
      EGF; EGF-like domain
      pfam02210
      Location:212341
      Laminin_G_2; Laminin G domain
      cl02436
      Location:604782
      COLFI; Fibrillar collagen C-terminal domain
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