Format

Send to:

Choose Destination
    • Showing Current items.

    EPHB2 EPH receptor B2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100405872, updated on 8-Sep-2017

    Summary

    Gene symbol
    EPHB2
    Gene description
    EPH receptor B2
    See related
    Ensembl:ENSCJAG00000005696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs

    Genomic context

    See EPHB2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    104 current Callithrix jacchus-3.2 (GCF_000004665.1) 7 NC_013902.1 (56783841..56926517)

    Chromosome 7 - NC_013902.1Genomic Context describing neighboring genes Neighboring gene complement C1q C chain Neighboring gene complement C1q B chain Neighboring gene uncharacterized LOC103794295 Neighboring gene lactamase beta like 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013902.1 Chromosome 7 Reference Callithrix jacchus-3.2

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Callithrix jacchus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Callithrix jacchus-3.2

    Genomic

    1. NC_013902.1 Reference Callithrix jacchus-3.2

      Range
      56783841..56926517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002750406.4XP_002750452.3  ephrin type-B receptor 2 isoform X1

      Conserved Domains (7) summary
      cd05065
      Location:625893
      PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
      cd09552
      Location:919989
      SAM_EPH-B2; SAM domain of EPH-B2 subfamily of tyrosine kinase receptors
      smart00454
      Location:919986
      SAM; Sterile alpha motif
      cd10477
      Location:19196
      EphR_LBD_B2; Ligand Binding Domain of Ephrin type-B Receptor 2
      pfam00041
      Location:437520
      fn3; Fibronectin type III domain
      pfam07714
      Location:630889
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:556625
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    2. XM_017974390.1XP_017829879.1  ephrin type-B receptor 2 isoform X2

    3. XM_017974391.1XP_017829880.1  ephrin type-B receptor 2 isoform X3

      Related
      ENSCJAP00000010658.2, ENSCJAT00000011258.2
    4. XM_017974392.1XP_017829881.1  ephrin type-B receptor 2 isoform X4

      UniProtKB/TrEMBL
      U3DP60
      Related
      ENSCJAP00000010639.2, ENSCJAT00000011239.2
      Conserved Domains (5) summary
      cd05065
      Location:616884
      PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
      cd09552
      Location:910980
      SAM_EPH-B2; SAM domain of EPH-B2 subfamily of tyrosine kinase receptors
      cd10477
      Location:19196
      EphR_LBD_B2; Ligand Binding Domain of Ephrin type-B Receptor 2
      pfam00041
      Location:437520
      fn3; Fibronectin type III domain
      pfam14575
      Location:548616
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    Support Center