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    pax9.L paired box 9 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100381067, updated on 6-Feb-2018

    Summary

    Official Symbol
    pax9.L
    Official Full Name
    paired box 9 L homeolog
    Primary source
    Xenbase:XB-GENE-864845
    Locus tag
    XELAEV_18039938mg
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    pax9; Pax-9; xpax9; sthag3; xpax-9
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See pax9.L in Genome Data Viewer
    Location:
    chromosome: 8L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (86054516..86085692)

    Chromosome 8L - NC_030738.1Genomic Context describing neighboring genes Neighboring gene NK2 homeobox 8 L homeolog Neighboring gene uncharacterized LOC108699211 Neighboring gene solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 L homeolog Neighboring gene mirror-image polydactyly 1 L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030738.1 Chromosome 8L Reference Xenopus_laevis_v2 Primary Assembly

    General protein information

    Preferred Names
    paired box 9 L homeolog
    Names
    paired box transcription factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001174014.2NP_001167485.1  paired box 9 L homeolog

      See identical proteins and their annotated locations for NP_001167485.1

      Status: VALIDATED

      Source sequence(s)
      LYTH01164140, LYTH01164141, LYTH01164143
      UniProtKB/TrEMBL
      Q5XH51
      Conserved Domains (1) summary
      cd00131
      Location:6131
      PAX; Paired Box domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030738.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      86054516..86085692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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