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    Acsl5 acyl-CoA synthetase long chain family member 5 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100379229, updated on 27-Jun-2018

    Summary

    Gene symbol
    Acsl5
    Gene description
    acyl-CoA synthetase long chain family member 5
    See related
    Ensembl:ENSCPOG00000006149
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs

    Genomic context

    See Acsl5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176408.1 (3231617..3276261, complement)

    NT_176408.1Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene 60S ribosomal protein L5-like Neighboring gene zinc finger DHHC-type containing 6 Neighboring gene guanylate cyclase 2G-like Neighboring gene tectorin beta

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NT_176408 Unplaced Scaffold Reference Cavpor3.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    long-chain-fatty-acid--CoA ligase 5
    Names
    acyl-CoA synthetase 5
    NP_001166574.1
    XP_005006027.1
    XP_013013584.1
    XP_013013585.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001173103.1NP_001166574.1  long-chain-fatty-acid--CoA ligase 5

      See identical proteins and their annotated locations for NP_001166574.1

      Status: PROVISIONAL

      Source sequence(s)
      AB049761
      UniProtKB/TrEMBL
      Q9ESL2
      Related
      ENSCPOP00000005545.2, ENSCPOT00000006213.3
      Conserved Domains (2) summary
      PLN02736
      Location:70680
      PLN02736; long-chain acyl-CoA synthetase
      cd05927
      Location:100677
      LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

    RefSeqs of Annotated Genomes: Cavia porcellus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cavpor3.0 Primary Assembly

    Genomic

    1. NT_176408.1 Reference Cavpor3.0 Primary Assembly

      Range
      3231617..3276261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013158131.2XP_013013585.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

      See identical proteins and their annotated locations for XP_013013585.1

      UniProtKB/TrEMBL
      H0V749
      Related
      ENSCPOP00000031771.1, ENSCPOT00000037926.1
      Conserved Domains (2) summary
      PLN02736
      Location:70680
      PLN02736; long-chain acyl-CoA synthetase
      cd05927
      Location:100677
      LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    2. XM_005005970.3XP_005006027.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

      See identical proteins and their annotated locations for XP_005006027.1

      UniProtKB/TrEMBL
      H0V749
      Conserved Domains (2) summary
      PLN02736
      Location:70680
      PLN02736; long-chain acyl-CoA synthetase
      cd05927
      Location:100677
      LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    3. XM_013158130.2XP_013013584.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

      See identical proteins and their annotated locations for XP_013013584.1

      UniProtKB/TrEMBL
      H0V749
      Conserved Domains (2) summary
      PLN02736
      Location:70680
      PLN02736; long-chain acyl-CoA synthetase
      cd05927
      Location:100677
      LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
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