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    DHX16 DEAH-box helicase 16 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100358431, updated on 3-Apr-2017

    Summary

    Gene symbol
    DHX16
    Gene description
    DEAH-box helicase 16
    See related
    Ensembl:ENSOCUG00000002163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs

    Genomic context

    See DHX16 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current OryCun2.0 (GCF_000003625.3) 12 NC_013680.1 (22689854..22708578, complement)

    Chromosome 12 - NC_013680.1Genomic Context describing neighboring genes Neighboring gene alpha tubulin acetyltransferase 1 Neighboring gene chromosome 12 open reading frame, human C6orf136 Neighboring gene protein phosphatase 1 regulatory subunit 18 Neighboring gene nurim

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013680.1 Chromosome 12 Reference OryCun2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Spliceosome, organism-specific biosystem (from KEGG)
      Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
    • Spliceosome, conserved biosystem (from KEGG)
      Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...

    General protein information

    Preferred Names
    putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
    Names
    DEAH (Asp-Glu-Ala-His) box polypeptide 16

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Oryctolagus cuniculus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OryCun2.0 Primary Assembly

    Genomic

    1. NC_013680.1 Reference OryCun2.0 Primary Assembly

      Range
      22689854..22708578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002714358.3XP_002714404.1  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16

      UniProtKB/TrEMBL
      G1SGY7
      Related
      ENSOCUP00000001868.2, ENSOCUT00000002164.3
      Conserved Domains (5) summary
      smart00487
      Location:402584
      DEXDc; DEAD-like helicases superfamily
      smart00847
      Location:801885
      HA2; Helicase associated domain (HA2) Add an annotation
      cd00046
      Location:419558
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      cd00079
      Location:583740
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      pfam07717
      Location:9201018
      OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
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