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    Abcb11 ATP binding cassette subfamily B member 11 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100337637, updated on 27-Jun-2018

    Summary

    Gene symbol
    Abcb11
    Gene description
    ATP binding cassette subfamily B member 11
    See related
    Ensembl:ENSCPOG00000005935
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Bsep
    Orthologs

    Genomic context

    See Abcb11 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176416.1 (20273590..20359068)

    NT_176416.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene dehydrogenase/reductase 9 Neighboring gene glucose-6-phosphatase catalytic subunit 2 Neighboring gene SPC25, NDC80 kinetochore complex component

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NT_176416 Unplaced Scaffold Reference Cavpor3.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001173091.1NP_001166562.1  bile salt export pump

      See identical proteins and their annotated locations for NP_001166562.1

      Status: PROVISIONAL

      Source sequence(s)
      GQ169125
      UniProtKB/TrEMBL
      C7DPK6
      Related
      ENSCPOP00000005355.2, ENSCPOT00000005998.3
      Conserved Domains (3) summary
      cd03249
      Location:10771316
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:141313
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:67371
      ABC_membrane; ABC transporter transmembrane region

    RefSeqs of Annotated Genomes: Cavia porcellus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cavpor3.0 Primary Assembly

    Genomic

    1. NT_176416.1 Reference Cavpor3.0 Primary Assembly

      Range
      20273590..20359068
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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