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    pdx1.S pancreatic and duodenal homeobox 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100337610, updated on 27-Jan-2018

    Summary

    Official Symbol
    pdx1.S
    Official Full Name
    pancreatic and duodenal homeobox 1 S homeolog
    Primary source
    Xenbase:XB-GENE-6464311
    Locus tag
    XELAEV_18016204mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ipf1; pdx1; PDX-1; STF-1; xlhbox8; XlHbox-8

    Genomic context

    See pdx1.S in Genome Data Viewer
    Location:
    chromosome: 2S
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (138299588..138318209, complement)

    Chromosome 2S - NC_030727.1Genomic Context describing neighboring genes Neighboring gene 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase-like Neighboring gene caudal type homeobox 2 S homeolog Neighboring gene GS homeobox 1 S homeolog Neighboring gene RNA polymerase I and III subunit D, gene 1 S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030727.1 Chromosome 2S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    pancreas/duodenum homeobox protein 1
    Names
    Homeobox protein 8
    XlHbox 8 protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001172211.1NP_001165682.1  pancreas/duodenum homeobox protein 1

      See identical proteins and their annotated locations for NP_001165682.1

      Status: PROVISIONAL

      Source sequence(s)
      X16849
      UniProtKB/Swiss-Prot
      P14837
      Conserved Domains (1) summary
      pfam00046
      Location:150203
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030727.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      138299588..138318209 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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