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    CPNE1 copine I [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100328904, updated on 3-Apr-2017

    Summary

    Gene symbol
    CPNE1
    Gene description
    copine I
    See related
    Ensembl:ENSOCUG00000023994
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus

    Genomic context

    See CPNE1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current OryCun2.0 (GCF_000003625.3) 4 NC_013672.1 (4177017..4213794)

    Chromosome 4 - NC_013672.1Genomic Context describing neighboring genes Neighboring gene reactive oxygen species modulator 1 Neighboring gene NFS1, cysteine desulfurase Neighboring gene RNA binding motif protein 12 Neighboring gene fer-1-like protein 4 Neighboring gene sperm associated antigen 4

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013672.1 Chromosome 4 Reference OryCun2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    copine-1
    Names
    copine I, isoform 8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001171493.1NP_001164964.1  copine-1

      See identical proteins and their annotated locations for NP_001164964.1

      Status: INFERRED

      Source sequence(s)
      DP001043
      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    RefSeqs of Annotated Genomes: Oryctolagus cuniculus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OryCun2.0 Primary Assembly

    Genomic

    1. NC_013672.1 Reference OryCun2.0 Primary Assembly

      Range
      4177017..4213794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008255974.2XP_008254196.1  copine-1 isoform X1

      See identical proteins and their annotated locations for XP_008254196.1

      Conserved Domains (6) summary
      COG0724
      Location:401611
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12512
      Location:422522
      RRM3_RBM12; RNA recognition motif 3 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12745
      Location:192
      RRM1_RBM12; RNA recognition motif 1 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12747
      Location:303377
      RRM2_RBM12; RNA recognition motif 2 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12749
      Location:546633
      RRM4_RBM12; RNA recognition motif 4 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12751
      Location:863937
      RRM5_RBM12; RNA recognition motif 5 in RNA-binding protein 12 (RBM12) and similar proteins
    2. XM_008255973.2XP_008254195.1  copine-1 isoform X1

      See identical proteins and their annotated locations for XP_008254195.1

      Conserved Domains (6) summary
      COG0724
      Location:401611
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12512
      Location:422522
      RRM3_RBM12; RNA recognition motif 3 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12745
      Location:192
      RRM1_RBM12; RNA recognition motif 1 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12747
      Location:303377
      RRM2_RBM12; RNA recognition motif 2 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12749
      Location:546633
      RRM4_RBM12; RNA recognition motif 4 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12751
      Location:863937
      RRM5_RBM12; RNA recognition motif 5 in RNA-binding protein 12 (RBM12) and similar proteins
    3. XM_008255976.2XP_008254198.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254198.1

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    4. XM_008255977.2XP_008254199.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254199.1

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    5. XM_008255978.2XP_008254200.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254200.1

      UniProtKB/TrEMBL
      B7NZJ1
      Related
      ENSOCUP00000023814.1, ENSOCUT00000028396.2
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    6. XM_017341628.1XP_017197117.1  copine-1 isoform X2

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    7. XM_008255980.2XP_008254202.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254202.1

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    8. XM_008255975.2XP_008254197.1  copine-1 isoform X1

      See identical proteins and their annotated locations for XP_008254197.1

      Conserved Domains (6) summary
      COG0724
      Location:401611
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12512
      Location:422522
      RRM3_RBM12; RNA recognition motif 3 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12745
      Location:192
      RRM1_RBM12; RNA recognition motif 1 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12747
      Location:303377
      RRM2_RBM12; RNA recognition motif 2 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12749
      Location:546633
      RRM4_RBM12; RNA recognition motif 4 in RNA-binding protein 12 (RBM12) and similar proteins
      cd12751
      Location:863937
      RRM5_RBM12; RNA recognition motif 5 in RNA-binding protein 12 (RBM12) and similar proteins
    9. XM_008255981.2XP_008254203.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254203.1

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
    10. XM_008255979.2XP_008254201.1  copine-1 isoform X2

      See identical proteins and their annotated locations for XP_008254201.1

      UniProtKB/TrEMBL
      B7NZJ1
      Conserved Domains (3) summary
      cd04047
      Location:138245
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:6124
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:251509
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
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