Format

Send to:

Choose Destination
    • Showing Current items.

    cd247 CD247 molecule [ Ictalurus punctatus (channel catfish) ]

    Gene ID: 100305023, updated on 13-Oct-2018

    Summary

    Gene symbol
    cd247
    Gene description
    CD247 molecule
    See related
    Ensembl:ENSIPUG00000011307
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ictalurus punctatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Orthologs

    Genomic context

    See cd247 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current IpCoco_1.2 (GCF_001660625.1) 26 NC_030441.1 (7008778..7025906)

    Chromosome 26 - NC_030441.1Genomic Context describing neighboring genes Neighboring gene late histone H2A.2.2-like Neighboring gene cellular repressor of E1A stimulated genes 1 Neighboring gene uncharacterized LOC108258594 Neighboring gene POU class 2 homeobox 1 Neighboring gene dual specificity phosphatase 27, atypical

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030441.1 Chromosome 26 Reference IpCoco_1.2 Primary Assembly

    General protein information

    Preferred Names
    T-cell surface glycoprotein CD3 zeta chain
    Names
    CD3 zeta

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001200262.1NP_001187191.1  T-cell surface glycoprotein CD3 zeta chain precursor

      See identical proteins and their annotated locations for NP_001187191.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ809774
      UniProtKB/TrEMBL
      C1KBH5
      Related
      ENSIPUP00000016754.1, ENSIPUT00000017461.1
      Conserved Domains (2) summary
      pfam02189
      Location:127146
      ITAM; Immunoreceptor tyrosine-based activation motif
      pfam11628
      Location:2656
      TCR_zetazeta; T-cell surface glycoprotein CD3 zeta chain

    RefSeqs of Annotated Genomes: Ictalurus punctatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IpCoco_1.2 Primary Assembly

    Genomic

    1. NC_030441.1 Reference IpCoco_1.2 Primary Assembly

      Range
      7008778..7025906
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center