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    LOC100281359 vacuolar protein sorting 29 [ Zea mays ]

    Gene ID: 100281359, updated on 3-Jun-2019

    Summary

    Gene symbol
    LOC100281359
    Gene description
    vacuolar protein sorting 29
    Locus tag
    ZEAMMB73_Zm00001d053371
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G068489

    Genomic context

    See LOC100281359 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current B73 RefGen_v4 (GCF_000005005.2) 4 NC_024462.2 (227976137..227984030, complement)
    100 previous assembly B73 RefGen_v3 (GCF_000005005.1) 4 NC_024462.1 (224201852..224209745, complement)

    Chromosome 4 - NC_024462.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase BSL2 homolog Neighboring gene uncharacterized LOC100192069 Neighboring gene uncharacterized LOC111591326 Neighboring gene zinc finger MYM-type protein 1-like

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Endocytosis, organism-specific biosystem (from KEGG)
      Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
    • Endocytosis, conserved biosystem (from KEGG)
      Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...

    General protein information

    Preferred Names
    vacuolar protein sorting 29
    NP_001147749.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001154277.2NP_001147749.1  vacuolar protein sorting 29

      See identical proteins and their annotated locations for NP_001147749.1

      Status: PROVISIONAL

      Source sequence(s)
      EU956435
      UniProtKB/TrEMBL
      B6SUM0
      Conserved Domains (1) summary
      cd07394
      Location:3180
      MPP_Vps29; Homo sapiens Vps29 and related proteins, metallophosphatase domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference B73 RefGen_v4 Primary Assembly

    Genomic

    1. NC_024462.2 Reference B73 RefGen_v4 Primary Assembly

      Range
      227976137..227984030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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