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    REG3G regenerating islet-derived 3 gamma [ Sus scrofa (pig) ]

    Gene ID: 100240745, updated on 2-Oct-2018

    Summary

    Gene symbol
    REG3G
    Gene description
    regenerating islet-derived 3 gamma
    See related
    Ensembl:ENSSSCG00000031177 Vega:OTTSUSG00000003051
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Expression
    Low expression observed in reference dataset See more

    Genomic context

    See REG3G in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (64847629..64850365, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (68078691..68081485, complement)

    Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene lithostathine-like Neighboring gene lithostathine-like Neighboring gene 60S ribosomal protein L7a Neighboring gene 6.8 kDa mitochondrial proteolipid pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Pathways from BioSystems

    General protein information

    Preferred Names
    regenerating islet-derived protein 3-gamma
    Names
    regenerating islet-derived family member 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001144847.1NP_001138319.1  regenerating islet-derived protein 3-gamma precursor

      See identical proteins and their annotated locations for NP_001138319.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ531495
      UniProtKB/TrEMBL
      B8YGC1
      Related
      ENSSSCP00000030575.2, ENSSSCT00000034135.2
      Conserved Domains (1) summary
      cd03594
      Location:41174
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

      Range
      64847629..64850365 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005662419.3XP_005662476.1  regenerating islet-derived protein 3-gamma isoform X2

      See identical proteins and their annotated locations for XP_005662476.1

      UniProtKB/TrEMBL
      B8YGC1
      Related
      ENSSSCP00000030478.1, OTTSUSP00000005718, ENSSSCT00000034539.2
      Conserved Domains (1) summary
      cd03594
      Location:41174
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)
    2. XM_021085605.1XP_020941264.1  regenerating islet-derived protein 3-gamma isoform X1

      Conserved Domains (1) summary
      cd03594
      Location:72205
      CLECT_REG-1_like; C-type lectin-like domain (CTLD) of the type found in Human REG-1 (lithostathine), REG-4, and avian eggshell-specific proteins: ansocalcin, structhiocalcin-1(SCA-1), and -2(SCA-2)
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