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    rab1a RAB1A, member RAS oncogene family [ Salmo salar (Atlantic salmon) ]

    Gene ID: 100196294, updated on 10-May-2017

    Summary

    Gene symbol
    rab1a
    Gene description
    RAB1A, member RAS oncogene family
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo

    Genomic context

    See rab1a in Genome Data Viewer
    Location:
    chromosome: ssa11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ICSASG_v2 (GCF_000233375.1) ssa11 NC_027310.1 (81385819..81393108)

    Chromosome ssa11 - NC_027310.1Genomic Context describing neighboring genes Neighboring gene protein FAM89B-like Neighboring gene EH domain-binding protein 1-like protein 1 Neighboring gene endosialin-like Neighboring gene hypoxia-inducible factor 1-alpha-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_027310.1 Chromosome ssa11 Reference ICSASG_v2 Primary Assembly

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001141323.1NP_001134795.1  ras-related protein Rab-1A

      See identical proteins and their annotated locations for NP_001134795.1

      Status: PROVISIONAL

      Source sequence(s)
      BT049120
      UniProtKB/TrEMBL
      B5XDK1
      Conserved Domains (1) summary
      cl21455
      Location:785
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ICSASG_v2 Primary Assembly

    Genomic

    1. NC_027310.1 Reference ICSASG_v2 Primary Assembly

      Range
      81385819..81393108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014129442.1XP_013984917.1  ras-related protein Rab-1A isoform X1

      UniProtKB/TrEMBL
      A0A1S3L1T6
      Conserved Domains (2) summary
      smart00175
      Location:9172
      RAB; Rab subfamily of small GTPases
      cd01869
      Location:7172
      Rab1_Ypt1; Rab GTPase family 1 includes the yeast homolog Ypt1
    2. XM_014129441.1XP_013984916.1  ras-related protein Rab-1A isoform X1

      UniProtKB/TrEMBL
      A0A1S3L1T6
      Conserved Domains (2) summary
      smart00175
      Location:9172
      RAB; Rab subfamily of small GTPases
      cd01869
      Location:7172
      Rab1_Ypt1; Rab GTPase family 1 includes the yeast homolog Ypt1
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